Loki

Nature Methods 2025
In Press

TADsplimer

Genome Biology 2020
https://genomebiology.biomedcentral.com/articles/10.1186/s13059-020-01992-7

StripDiff

Science Advances 2022
https://www.science.org/doi/full/10.1126/sciadv.abk2246

cellDancer

Nature Biotechnology 2023
https://www.nature.com/articles/s41587-023-01728-5

LGC

Bioinformatics 2019
https://academic.oup.com/bioinformatics/article/35/17/2949/5288512

MACMIC

Genomics, proteomics & bioinformatics 2021
https://www.sciencedirect.com/science/article/pii/S1672022921000577